About R2DT

R2DT documentation
Method overview
- Pipeline

Getting started

Installation
- Setup a development environment
- Manual installation
Command line reference
Annotations and data layers
Editing R2DT diagrams
API and Python package
- API
- Python package
  - Running r2dt-client in Google Colab
Embeddable widget
- Live example

3D structures

Visualising RNA from PDB structures

Alignments

Processing Stockholm alignments
Annotating viral genomes
Covariation visualisation

Updating R2DT

Creating and updating templates
Updating documentation
- Regenerating doc images
- Verifying documentation
Testing
- Useful commands
- Updating example files
Docker images
GitHub Actions
Release process
- git workflow

Project info

Team
- Contributors
- Acknowledgements
News and releases

R2DT

News and releases
R2DT is officially launched
View page source

R2DT is officially launched

Artist's impression of R2DT software for RNA structures. Credit: Spencer Phillips EMBL-EBI

R2DT was officially launched on June 9th, 2021.

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